STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHANK2SH3 and multiple ankyrin repeat domains 2. (1791 aa)    
Predicted Functional Partners:
DLGAP1
DLG associated protein 1.
    
 0.928
DLGAP3
DLG associated protein 3.
    
 0.904
DLGAP2
DLG associated protein 2.
    
 0.895
DLGAP4
DLG associated protein 4.
    
 0.874
DLG4
Discs large MAGUK scaffold protein 4.
    
 0.868
ENSMMMP00000007547
annotation not available
    
 
0.833
NLGN3
Neuroligin 3.
    
 0.797
ENSMMMP00000025168
annotation not available
    
 0.777
HOMER1
Homer scaffold protein 1.
    
 0.731
NLGN1
Neuroligin 1.
    
 0.725
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.