Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMMP00000004571annotation not available (403 aa)    
Predicted Functional Partners:
TRIM63
Tripartite motif containing 63.
   
  0.931
STAT3
Signal transducer and activator of transcription 3.
    
 0.903
TRIM55
Tripartite motif containing 55.
   
 
 0.872
SQSTM1
Sequestosome 1.
    
 0.854
ZDHHC22
Zinc finger DHHC-type containing 22.
    
   0.828
NRM
Nurim.
    
   0.648
FLNC
Filamin C.
   
 0.625
TCAP
Titin-cap.
   
 
 0.617
UBQLN4
Ubiquilin 4.
    
 0.601
TRIM23
Tripartite motif containing 23.
    
 0.599
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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