STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRWD1Bromodomain and WD repeat domain containing 1. (1525 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
   
 0.866
DDB1
Damage specific DNA binding protein 1.
    
 
 0.858
SMARCA4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.
   
 0.841
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.816
SMARCA2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.
   
 0.806
CUL4A
Cullin 4A.
   
 
 0.795
CUL4B
Cullin 4B.
   
 
 0.767
PSMG2
Proteasome assembly chaperone 2.
     
 0.713
KIF7
Kinesin family member 7.
   
 0.703
KIF27
Kinesin family member 27.
   
 0.703
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.