STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRWD1Bromodomain and WD repeat domain containing 1. (1525 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.859
ENSMMMP00000024859
annotation not available
   
0.798
DDB1
Damage specific DNA binding protein 1.
    
 0.792
TAF12
TATA-box binding protein associated factor 12.
   
 0.792
TAF10
TATA-box binding protein associated factor 10.
    
 0.791
TAF2
TATA-box binding protein associated factor 2.
   
 0.781
IFT140
Intraflagellar transport 140.
    
 0.781
TEX10
Testis expressed 10.
   
 0.778
WDR19
WD repeat domain 19.
    
 0.776
CDC16
Cell division cycle 16.
   
 0.773
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.