STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLPPR1Phospholipid phosphatase related 1. (304 aa)    
Predicted Functional Partners:
MED4
Mediator complex subunit 4.
    
 0.945
MED14
Mediator complex subunit 14.
    
 0.942
MED20
Mediator complex subunit 20.
    
 0.926
MED6
Mediator complex subunit 6.
    
 0.924
MED10
Mediator complex subunit 10.
    
 0.923
Med17
annotation not available
    
 0.922
MED7
Mediator complex subunit 7.
    
 0.919
MED23
Mediator complex subunit 23.
   
 0.917
MED30
Mediator complex subunit 30.
    
 0.916
STXBP3
Syntaxin binding protein 3.
    
   0.913
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.