Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDK18Cyclin dependent kinase 18. (451 aa)    
Predicted Functional Partners:
CDK15
Cyclin dependent kinase 15.
    
   0.931
CDC6
Cell division cycle 6.
   
 0.864
YWHAB
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta.
    
 0.858
CCNH
Cyclin H.
    
 0.848
WDR41
WD repeat domain 41.
   
 0.832
ENSMMMP00000012423
annotation not available
   
 0.832
CCNB2
Cyclin B2.
   
 0.832
CCNB1
Cyclin B1.
   
 0.832
CDC20
Cell division cycle 20.
   
 0.831
CDC20B
Cell division cycle 20B.
   
 0.831
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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