Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF605Zinc finger protein 605. (687 aa)    
Predicted Functional Partners:
NME8
NME/NM23 family member 8.
    
 0.550
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.545
GART
annotation not available
     
  0.527
TRIM28
Tripartite motif containing 28.
    
 0.497
ENSMMMP00000016269
annotation not available
    
  0.468
ENSMMMP00000016322
annotation not available
    
  0.468
BARD1
BRCA1 associated RING domain 1.
    
 0.423
MRPS11
Mitochondrial ribosomal protein S11.
    
  0.422
SUFU
SUFU negative regulator of hedgehog signaling.
    
 0.421
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.417
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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