STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTPBP6GTP binding protein 6 (putative). (509 aa)    
Predicted Functional Partners:
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
   
 
 0.907
ENSMMMP00000021016
annotation not available
   
 
 0.890
MRPL58
Mitochondrial ribosomal protein L58.
   
 
 0.871
RPL11
Ribosomal protein L11.
   
 
 0.866
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.855
MRPL32
Mitochondrial ribosomal protein L32.
   
 
 0.849
MRPL21
Mitochondrial ribosomal protein L21.
   
 
 0.845
MRPL40
Mitochondrial ribosomal protein L40.
    
 
 0.844
TRIT1
tRNA isopentenyltransferase 1.
  
  
 0.842
MRPL19
Mitochondrial ribosomal protein L19.
   
   0.840
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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