STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTPBP6GTP binding protein 6 (putative). (509 aa)    
Predicted Functional Partners:
MRPL32
Mitochondrial ribosomal protein L32.
   
 
 0.992
MRPL21
Mitochondrial ribosomal protein L21.
   
   0.988
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.988
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.987
MRPL33
Mitochondrial ribosomal protein L33.
   
   0.986
ENSMMMP00000018499
annotation not available
   
   0.983
ENSMMMP00000021016
annotation not available
   
 
 0.974
RPL11
Ribosomal protein L11.
   
 
 0.971
MRPL3
Mitochondrial ribosomal protein L3.
   
 
 0.931
RPL3
Ribosomal protein L3.
   
 
 0.931
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.