STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF280CZinc finger protein 280C. (746 aa)    
Predicted Functional Partners:
CDYL
Chromodomain Y like.
    
 0.525
CDYL2
Chromodomain Y like 2.
    
 0.523
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.512
MRPS6
Mitochondrial ribosomal protein S6.
    
  0.502
MRPS28
Mitochondrial ribosomal protein S28.
    
  0.502
MRPS9
Mitochondrial ribosomal protein S9.
    
  0.502
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
    
  0.502
MRPS27
Mitochondrial ribosomal protein S27.
    
  0.500
Mrps17
annotation not available
    
  0.500
MRPS25
Mitochondrial ribosomal protein S25.
    
  0.500
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.