STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRODH2Proline dehydrogenase 2. (456 aa)    
Predicted Functional Partners:
ALDH4A1
Aldehyde dehydrogenase 4 family member A1.
  
 0.953
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
   
 0.943
PYCR3
Pyrroline-5-carboxylate reductase 3.
   
 0.908
PYCR1
Pyrroline-5-carboxylate reductase 1.
   
 0.900
ENSMMMP00000027572
annotation not available
   
 0.900
OAT
Ornithine aminotransferase.
    
 0.895
ENSMMMP00000013486
annotation not available
  
 
 0.881
ENSMMMP00000005893
annotation not available
 
   
 0.877
CRYM
Crystallin mu.
  
 
 0.876
ALDH5A1
Aldehyde dehydrogenase 5 family member A1.
  
 0.875
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.