STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TYMPThymidine phosphorylase. (511 aa)    
Predicted Functional Partners:
DERA
Deoxyribose-phosphate aldolase.
 
 0.987
CDA
Cytidine deaminase.
 
 
 0.978
UPRT
Uracil phosphoribosyltransferase homolog.
  
 
 0.968
UPP1
Uridine phosphorylase 1.
  
 
 0.966
UPP2
Uridine phosphorylase 2.
  
 
 0.965
TK1
Thymidine kinase 1.
    
 0.939
UMPS
Uridine monophosphate synthetase.
    
 0.937
APRT
Adenine phosphoribosyltransferase.
    
 0.936
PNP
Purine nucleoside phosphorylase.
    
 0.934
DPYD
Dihydropyrimidine dehydrogenase.
    
 0.917
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.