Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMMP00000006090annotation not available (54 aa)    
Predicted Functional Partners:
CLIC2
Chloride intracellular channel 2.
    
   0.757
RPP21
Ribonuclease P/MRP subunit p21.
   
 
  0.685
POP5
POP5 homolog, ribonuclease P/MRP subunit.
   
 
  0.663
POP4
POP4 homolog, ribonuclease P/MRP subunit.
     
  0.656
RPP30
Ribonuclease P/MRP subunit p30.
     
  0.656
POP1
POP1 homolog, ribonuclease P/MRP subunit.
     
  0.656
KRI1
KRI1 homolog.
     
  0.656
ENSMMMP00000015894
annotation not available
  
     0.472
ENSMMMP00000008551
annotation not available
  
     0.467
ENSMMMP00000019509
annotation not available
  
     0.467
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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