STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMED9Transmembrane p24 trafficking protein 9. (235 aa)    
Predicted Functional Partners:
TMED10
Transmembrane p24 trafficking protein 10.
   
0.973
TMED2
Transmembrane p24 trafficking protein 2.
   
0.962
TMED3
Transmembrane p24 trafficking protein 3.
   
0.818
ENSMMMP00000007526
annotation not available
   
 0.818
ENSMMMP00000007538
annotation not available
   
0.818
SURF4
Surfeit 4.
   
 0.808
SEC22B
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene).
   
 0.690
COPB1
Coatomer protein complex subunit beta 1.
   
 0.682
NAGLU
N-acetyl-alpha-glucosaminidase.
    
   0.678
COPB2
Coatomer protein complex subunit beta 2.
    
  0.653
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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