Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMMP00000006533annotation not available (163 aa)    
Predicted Functional Partners:
RPL37
Ribosomal protein L37.
   
 0.996
RPS9
Ribosomal protein S9.
   
 0.995
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.995
Rps3
annotation not available
   
 0.995
RPS26
Ribosomal protein S26.
   
 0.995
RPL11
Ribosomal protein L11.
   
 0.995
RPS8
Ribosomal protein S8.
   
 0.995
ENSMMMP00000023761
annotation not available
   
 0.995
RPS21
Ribosomal protein S21.
   
 0.994
RPL13
Ribosomal protein L13.
   
 0.994
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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