STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIPGLipase G, endothelial type. (500 aa)    
Predicted Functional Partners:
APOA5
Apolipoprotein A5.
    
 0.951
ENSMMMP00000016570
annotation not available
     
 0.936
ENSMMMP00000016591
annotation not available
     
 0.934
APOA4
Apolipoprotein A4.
     
 0.928
VLDLR
Very low density lipoprotein receptor.
     
 0.926
LPL
Lipoprotein lipase.
  
  
 
0.923
APOA1
Apolipoprotein A1.
     
 0.923
APOC1
Apolipoprotein C1.
     
 0.920
ENSMMMP00000016942
annotation not available
    
 0.870
ACSL5
acyl-CoA synthetase long chain family member 5.
    
 0.869
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.