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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DLG2Discs large MAGUK scaffold protein 2. (816 aa)    
Predicted Functional Partners:
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
   
 0.973
GRIN2B
Glutamate ionotropic receptor NMDA type subunit 2B.
    
 0.968
GRIN2A
Glutamate ionotropic receptor NMDA type subunit 2A.
    
 0.967
CASK
Calcium/calmodulin dependent serine protein kinase.
   
0.949
LLGL2
LLGL scribble cell polarity complex component 2.
    
 0.933
PTEN
Phosphatase and tensin homolog.
   
 0.920
DLG4
Discs large MAGUK scaffold protein 4.
  
 
0.920
DLGAP1
DLG associated protein 1.
    
 0.916
LIN7A
Lin-7 homolog A, crumbs cell polarity complex component.
   
0.907
GRIN2C
Glutamate ionotropic receptor NMDA type subunit 2C.
    
 0.906
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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