STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UVSSAUV stimulated scaffold protein A. (717 aa)    
Predicted Functional Partners:
USP7
Ubiquitin specific peptidase 7.
    
 0.996
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 
 0.955
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
    
 
 0.943
ENSMMMP00000003118
annotation not available
    
 
 0.936
ERCC8
ERCC excision repair 8, CSA ubiquitin ligase complex subunit.
    
 
 0.936
ENSMMMP00000013171
annotation not available
    
 
 0.936
GTF2H1
General transcription factor IIH subunit 1.
    
 
 0.932
USP40
Ubiquitin specific peptidase 40.
    
 0.923
DDB1
Damage specific DNA binding protein 1.
    
 
 0.915
Polr2a
annotation not available
    
 
 0.881
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.