STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTMR1Myotubularin related protein 1. (631 aa)    
Predicted Functional Partners:
MTMR2
Myotubularin related protein 2.
  
 
0.914
PIK3C2A
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha.
    
 0.908
PIK3C2B
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta.
    
 0.908
PIK3C2G
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma.
    
 0.908
SBF2
SET binding factor 2.
   
0.901
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.898
FIG4
FIG4 phosphoinositide 5-phosphatase.
     
 0.898
CDIPT
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
 0.872
PIKFYVE
Phosphoinositide kinase, FYVE-type zinc finger containing.
     
 0.871
INPP4A
Inositol polyphosphate-4-phosphatase type I A.
   
 
 0.869
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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