STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C17orf75Chromosome 17 open reading frame 75. (394 aa)    
Predicted Functional Partners:
VPS25
Vacuolar protein sorting 25 homolog.
   
 0.995
SNF8
SNF8 subunit of ESCRT-II.
    
 0.992
VPS36
Vacuolar protein sorting 36 homolog.
    
 0.992
Tm9sf1
annotation not available
    
 0.988
VPS4B
Vacuolar protein sorting 4 homolog B.
    
 0.984
ENSMMMP00000015977
annotation not available
    
 0.984
CHMP2A
Charged multivesicular body protein 2A.
   
 0.984
ENSMMMP00000010504
annotation not available
    
 0.983
UEVLD
UEV and lactate/malate dehyrogenase domains.
   
 0.971
VPS28
VPS28 subunit of ESCRT-I.
   
 0.969
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.