STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMMP00000015837annotation not available (161 aa)    
Predicted Functional Partners:
ENSMMMP00000005648
annotation not available
   
 0.781
IGHM
Immunoglobulin heavy constant mu.
  
  0.690
JCHAIN
Joining chain of multimeric IgA and IgM.
   
 0.682
ENSMMMP00000024070
annotation not available
    
  0.659
MAP3K3
Mitogen-activated protein kinase kinase kinase 3.
    
  0.654
MAP3K2
Mitogen-activated protein kinase kinase kinase 2.
    
  0.654
RPA2
Replication protein A2.
    
 0.643
TRAV22
T cell receptor alpha variable 22.
  
 
0.610
HLA-DRA
Major histocompatibility complex, class II, DR alpha.
    
 0.593
ENSMMMP00000021324
annotation not available
    
 0.593
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.