STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMT2Base methyltransferase of 25S rRNA 2 homolog. (405 aa)    
Predicted Functional Partners:
C12orf66
Chromosome 12 open reading frame 66.
    
 0.991
ENSMMMP00000019960
annotation not available
    
 0.987
ITFG2
Integrin alpha FG-GAP repeat containing 2.
    
 0.985
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.980
NPRL2
NPR2 like, GATOR1 complex subunit.
    
 0.976
KPTN
Kaptin, actin binding protein.
    
 0.971
NPRL3
NPR3 like, GATOR1 complex subunit.
   
 0.967
CASTOR1
Cytosolic arginine sensor for mTORC1 subunit 1.
     
 0.950
PPP1CC
Protein phosphatase 1 catalytic subunit gamma.
    
 0.935
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
    
 0.935
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.