STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107139865annotation not available (416 aa)    
Predicted Functional Partners:
CRY1
Cryptochrome circadian regulator 1.
    
 0.999
PER2
Period circadian regulator 2.
    
 0.992
ENSMMMP00000001204
annotation not available
    
 0.988
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
    
 0.988
PER1
Period circadian regulator 1.
    
 0.987
CRY2
Cryptochrome circadian regulator 2.
    
 0.982
PER3
Period circadian regulator 3.
    
 0.978
BYSL
Bystin like.
    
 0.968
RIOK2
RIO kinase 2.
    
 0.966
CSNK1D
Casein kinase 1 delta.
  
 
0.964
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.