STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSKH1Protein serine kinase H1. (424 aa)    
Predicted Functional Partners:
CALML6
Calmodulin like 6.
   
 0.733
PLA2G4A
Phospholipase A2 group IVA.
    
 0.729
TMEM129
Transmembrane protein 129.
   
    0.727
CALML4
Calmodulin like 4.
   
 0.725
ENSMMMP00000006362
annotation not available
   
 0.675
ENSMMMP00000009792
annotation not available
   
 0.675
ENSMMMP00000010528
annotation not available
   
 0.675
CALM2
Calmodulin 2.
   
 0.675
CALM3
Calmodulin 3.
   
 0.675
CALML5
Calmodulin like 5.
   
 0.675
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.