STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX9DExH-box helicase 9. (1279 aa)    
Predicted Functional Partners:
AGO2
Argonaute RISC catalytic component 2.
   
 0.991
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.987
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 0.980
DICER1
Dicer 1, ribonuclease III.
   
 0.975
DDX6
DEAD-box helicase 6.
  
 0.971
DROSHA
Drosha ribonuclease III.
   
 0.969
DDX5
DEAD-box helicase 5.
  
 0.968
AGO1
Argonaute RISC component 1.
   
 0.967
ENSMMMP00000002877
annotation not available
    
 0.965
ENSMMMP00000004634
annotation not available
    
 0.965
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.