STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUL2Cullin 2. (745 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
    
 0.999
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.994
VHL
Von Hippel-Lindau tumor suppressor.
    
 0.992
COPS2
COP9 signalosome subunit 2.
   
  0.992
ENSMMMP00000027966
annotation not available
    
 0.992
RBX1
Ring-box 1.
    
 0.986
ENSMMMP00000003632
annotation not available
   
 0.985
ENSMMMP00000004447
annotation not available
   
 0.985
ENSMMMP00000005892
annotation not available
   
 0.985
ENSMMMP00000008833
annotation not available
   
 0.985
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.