STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBPJRecombination signal binding protein for immunoglobulin kappa J region. (487 aa)    
Predicted Functional Partners:
NOTCH1
Notch receptor 1.
    
 0.999
MAML1
Mastermind like transcriptional coactivator 1.
    
 0.999
NOTCH3
Notch receptor 3.
    
 0.995
NOTCH2
Notch receptor 2.
    
 0.984
ENSMMMP00000001982
annotation not available
    
 0.972
FHL1
Four and a half LIM domains 1.
    
 
 0.970
NCOR1
Nuclear receptor corepressor 1.
    
 0.964
MAML3
Mastermind like transcriptional coactivator 3.
    
 0.950
NOTCH4
Notch receptor 4.
    
 0.950
ENSMMMP00000003672
annotation not available
    
 0.949
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.