STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF436Zinc finger protein 436. (452 aa)    
Predicted Functional Partners:
GART
annotation not available
     
 0.582
TRIM28
Tripartite motif containing 28.
    
 0.579
ENSMMMP00000016269
annotation not available
    
 0.532
SUFU
SUFU negative regulator of hedgehog signaling.
   
 0.524
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.521
BARD1
BRCA1 associated RING domain 1.
    
  0.520
ENSMMMP00000016322
annotation not available
    
  0.518
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.513
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.512
MRPS11
Mitochondrial ribosomal protein S11.
    
  0.509
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.