STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LONP1Lon peptidase 1, mitochondrial. (957 aa)    
Predicted Functional Partners:
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.934
SAMM50
SAMM50 sorting and assembly machinery component.
  
 
 0.916
CLPP
Caseinolytic mitochondrial matrix peptidase proteolytic subunit.
  
 
 0.890
GRPEL1
GrpE like 1, mitochondrial.
  
  
 0.870
GRPEL2
GrpE like 2, mitochondrial.
  
  
 0.870
CLPX
Caseinolytic mitochondrial matrix peptidase chaperone subunit.
  
 
 0.864
NCDN
Neurochondrin.
     
 0.808
TOMM40
Translocase of outer mitochondrial membrane 40.
   
 
 0.802
TYSND1
Trypsin domain containing 1.
  
 0.789
TOMM40L
Translocase of outer mitochondrial membrane 40 like.
   
 
 0.789
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.