STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107150342annotation not available (110 aa)    
Predicted Functional Partners:
CCR1
C-C motif chemokine receptor 1.
   
 0.991
LOC107155306
annotation not available
   
 0.987
CCR4
C-C motif chemokine receptor 4.
   
 0.968
CCL21
C-C motif chemokine ligand 21.
    
 0.963
ENSMMMP00000012135
annotation not available
   
 0.931
CCL5
C-C motif chemokine ligand 5.
    
0.918
CCR5
C-C motif chemokine receptor 5 (gene/pseudogene).
   
 0.917
CCL11
C-C motif chemokine ligand 11.
    
 0.913
CCR6
C-C motif chemokine receptor 6.
    
 0.911
CX3CR1
C-X3-C motif chemokine receptor 1.
    
 0.909
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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