STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUL4ACullin 4A. (775 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
   
 0.999
DCAF1
DDB1 and CUL4 associated factor 1.
   
 0.999
RBX1
Ring-box 1.
    
 0.999
DDB2
Damage specific DNA binding protein 2.
    
 0.998
CRBN
Cereblon.
    
 0.997
DTL
Denticleless E3 ubiquitin protein ligase homolog.
    
 0.995
CUL4B
Cullin 4B.
  
 
0.995
DCAF11
DDB1 and CUL4 associated factor 11.
    
 0.995
Det1
annotation not available
    
 0.992
DDA1
DET1 and DDB1 associated 1.
    
 0.991
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.