STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALKBH7alkB homolog 7. (221 aa)    
Predicted Functional Partners:
NDUFB7
NADH:ubiquinone oxidoreductase subunit B7.
   
    0.768
AFDN
Afadin, adherens junction formation factor.
    
  0.762
NDUFS8
NADH:ubiquinone oxidoreductase core subunit S8.
   
  
 0.745
MRPS34
Mitochondrial ribosomal protein S34.
   
    0.745
FTO
FTO alpha-ketoglutarate dependent dioxygenase.
     
 0.733
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
   
    0.643
YJEFN3
YjeF N-terminal domain containing 3.
   
    0.643
ALKBH6
alkB homolog 6.
   
  
 0.606
ALKBH4
alkB homolog 4, lysine demethylase.
   
  
 0.600
MED7
Mediator complex subunit 7.
   
 
  0.573
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.