STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XAB2XPA binding protein 2. (855 aa)    
Predicted Functional Partners:
PRPF19
pre-mRNA processing factor 19.
   
 0.999
PPIE
Peptidylprolyl isomerase E.
   
 0.999
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 0.999
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
0.999
SF3A3
Splicing factor 3a subunit 3.
   
 0.999
CWC15
CWC15 spliceosome associated protein homolog.
    
 0.999
PLRG1
Pleiotropic regulator 1.
   
 0.999
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.999
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
    
 0.999
SF3A1
Splicing factor 3a subunit 1.
   
 0.999
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.