STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC9BCoiled-coil domain containing 9B. (542 aa)    
Predicted Functional Partners:
ENSMMMP00000011964
annotation not available
   
 0.680
ENSMMMP00000015486
annotation not available
  
 
 0.661
HLA-DMA
Major histocompatibility complex, class II, DM alpha.
   
  0.651
TEX10
Testis expressed 10.
    
 0.626
HLA-DRA
Major histocompatibility complex, class II, DR alpha.
   
  0.626
ENSMMMP00000021324
annotation not available
   
  0.626
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.615
HLA-DOA
Major histocompatibility complex, class II, DO alpha.
   
  0.606
HLA-DPA1
Major histocompatibility complex, class II, DP alpha 1.
   
  0.606
RHBDL3
Rhomboid like 3.
    
 0.605
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.