STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IGFBP7Insulin like growth factor binding protein 7. (231 aa)    
Predicted Functional Partners:
IGF1
Insulin like growth factor 1.
    
 
 0.697
IGF2
Insulin like growth factor 2.
    
 
 0.640
INS
Insulin.
    
 
 0.633
FREM3
FRAS1 related extracellular matrix 3.
      
 0.577
FREM1
FRAS1 related extracellular matrix 1.
      
 0.577
SAMD7
Sterile alpha motif domain containing 7.
   
 
  0.487
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
   
 
  0.487
FAM20B
FAM20B glycosaminoglycan xylosylkinase.
   
 
  0.487
ENSMMMP00000014034
annotation not available
   
 
  0.460
JUN
Jun proto-oncogene, AP-1 transcription factor subunit.
    
  0.440
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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