STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMC5Transmembrane channel like 5. (758 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.806
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.706
ARID4A
AT-rich interaction domain 4A.
    
 0.696
ARID4B
AT-rich interaction domain 4B.
    
 0.696
EFHB
EF-hand domain family member B.
    
 
 0.651
SLF1
SMC5-SMC6 complex localization factor 1.
   
 0.615
ENSMMMP00000014535
annotation not available
    
 0.614
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.590
GLYR1
Glyoxylate reductase 1 homolog.
    
  0.579
MST1R
Macrophage stimulating 1 receptor.
    
 0.578
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.