STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDCBP2Syndecan binding protein 2. (292 aa)    
Predicted Functional Partners:
ENSMMMP00000013882
annotation not available
    
 0.862
SDC4
Syndecan 4.
    
 
 0.846
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
 0.825
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.781
IFT57
Intraflagellar transport 57.
    
 0.762
IFT80
Intraflagellar transport 80.
    
 0.756
TRAF3IP1
TRAF3 interacting protein 1.
    
 0.756
IFT172
Intraflagellar transport 172.
    
 0.751
NFASC
Neurofascin.
     
 0.745
IFT88
Intraflagellar transport 88.
    
 0.731
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.