STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMMP00000027486annotation not available (1086 aa)    
Predicted Functional Partners:
NR1H2
Nuclear receptor subfamily 1 group H member 2.
    
 0.695
NR1H3
Nuclear receptor subfamily 1 group H member 3.
    
 0.695
APOA1
Apolipoprotein A1.
     
 0.677
ENSMMMP00000010450
annotation not available
  
 
0.608
ENSMMMP00000026062
annotation not available
    
 0.586
LOC107146539
annotation not available
  
 
0.580
ENSMMMP00000026270
annotation not available
  
 
0.580
ABCA3
ATP binding cassette subfamily A member 3.
  
 
0.573
ENSMMMP00000026257
annotation not available
  
 
0.572
ENSMMMP00000025244
annotation not available
    
 0.553
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.