STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAR1Hydroxycarboxylic acid receptor 1. (343 aa)    
Predicted Functional Partners:
EDN1
Endothelin 1.
    
  0.887
EDN3
Endothelin 3.
    
  0.886
GNAI2
G protein subunit alpha i2.
    
  0.875
GNAI3
G protein subunit alpha i3.
    
  0.874
NPY
Neuropeptide Y.
    
 0.870
SST
Somatostatin.
    
  0.865
GHRL
Ghrelin and obestatin prepropeptide.
    
  0.865
AVP
Arginine vasopressin.
   
  0.851
GNAI1
G protein subunit alpha i1.
    
  0.798
ENSMMMP00000027380
annotation not available
   
  0.782
Your Current Organism:
Marmota marmota
NCBI taxonomy Id: 9994
Other names: Alpine marmot, M. marmota marmota, Marmota marmota marmota
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.