STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENZ03327.1Hypothetical protein. (539 aa)    
Predicted Functional Partners:
ENZ03326.1
RluA family pseudouridine synthase.
       0.835
ENZ01633.1
UPF0297 protein.
  
     0.707
ENZ02187.1
Hypothetical protein.
  
     0.670
ENZ03324.1
Hypothetical protein.
  
    0.616
ENZ03325.1
Amidohydrolase.
  
    0.606
ENZ00789.1
RNA polymerase sigma-H factor.
  
    0.595
ENZ03644.1
Hypothetical protein.
  
     0.568
ENZ03323.1
Nicotinate phosphoribosyltransferase.
       0.567
ENZ00447.1
Hypothetical protein.
 
     0.510
ENZ00207.1
Lon family ATP-dependent protease.
  
     0.456
Your Current Organism:
Clostridium colicanis 209318
NCBI taxonomy Id: 999411
Other names: C. colicanis 209318, Clostridium colicanis str. 209318, Clostridium colicanis strain 209318
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.