STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENZ00345.1Spore cortex biosynthesis protein YabQ. (129 aa)    
Predicted Functional Partners:
ENZ00346.1
Sporulation protein YabP.
  
  
 0.972
ENZ00344.1
Hypothetical protein.
 
    0.874
ENZ00348.1
DNA-binding protein HU.
  
    0.846
ENZ00347.1
RNA-binding S4 protein.
  
    0.837
ENZ00394.1
Hypothetical protein.
  
     0.768
ENZ00442.1
Hypothetical protein.
  
     0.767
ENZ01044.1
CotS family spore coat protein.
  
     0.744
ENZ02190.1
CotS family spore coat protein.
  
     0.738
ENZ01039.1
CotS family spore coat protein.
  
     0.728
ENZ02633.1
Hypothetical protein.
  
     0.725
Your Current Organism:
Clostridium colicanis 209318
NCBI taxonomy Id: 999411
Other names: C. colicanis 209318, Clostridium colicanis str. 209318, Clostridium colicanis strain 209318
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.