STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENY99831.1Ribosomal protein L25, Ctc-form. (178 aa)    
Predicted Functional Partners:
ENZ01799.1
30S ribosomal protein S15.
   
 0.983
ENZ00740.1
50S ribosomal protein L13.
  
 
 0.977
ENZ01282.1
50S ribosomal protein L27.
  
 
 0.974
ENZ01284.1
50S ribosomal protein L21.
  
 
 0.974
ENZ00201.1
30S ribosomal protein S6.
  
 
 0.974
ENZ00206.1
50S ribosomal protein L9.
  
 
 0.974
ENZ01779.1
30S ribosomal protein S2.
  
 
 0.973
ENZ00739.1
30S ribosomal protein S9.
   
 
 0.973
ENZ00747.1
30S ribosomal protein S4.
   
 
 0.973
ENZ00762.1
50S ribosomal protein L5.
   
 
 0.973
Your Current Organism:
Clostridium colicanis 209318
NCBI taxonomy Id: 999411
Other names: C. colicanis 209318, Clostridium colicanis str. 209318, Clostridium colicanis strain 209318
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.