STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMD17648.1Hypothetical protein. (224 aa)    
Predicted Functional Partners:
EMD15896.1
Hypothetical protein.
 
 
 0.993
EMD16289.1
PTS system, Fru family, IIC component.
 
 
 0.990
EMD16501.1
PTS system, glucose subfamily, IIA component.
 
 0.986
EMD17426.1
Hypothetical protein.
 
 
 0.976
EMD17689.1
PTS system, mannose/fructose/sorbose family, IIB component.
  
 
 0.951
EMD17590.1
HPr family phosphocarrier.
  
 0.943
EMD16533.1
HPr family phosphocarrier.
  
 0.943
EMD16900.1
Hypothetical protein.
    
 0.918
EMD16290.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
 
 0.856
EMD17167.1
Hypothetical protein.
 
  
  0.835
Your Current Organism:
Eggerthia catenaformis
NCBI taxonomy Id: 999415
Other names: E. catenaformis OT 569 = DSM 20559, Eggerthia catenaformis DSM 20559, Eggerthia catenaformis OT 569, Eggerthia catenaformis OT 569 = DSM 20559, Lactobacillus catenaformis DSM 20559 = OT 569, Lactobacillus catenaformis OT 569
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.