STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMD17368.1Hypothetical protein. (319 aa)    
Predicted Functional Partners:
EMD17367.1
Hypothetical protein.
 
  
 0.895
EMD17359.1
Hypothetical protein.
 
  
 0.842
EMD17362.1
Hypothetical protein.
  
 
 0.839
EMD17360.1
TDP-4-keto-6-deoxy-D-glucose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.835
EMD17358.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.821
EMD17357.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.774
EMD17369.1
Hypothetical protein.
       0.773
EMD17361.1
Hypothetical protein.
 
    
0.757
EMD17344.1
Hypothetical protein.
 
 
 0.748
EMD17363.1
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.741
Your Current Organism:
Eggerthia catenaformis
NCBI taxonomy Id: 999415
Other names: E. catenaformis OT 569 = DSM 20559, Eggerthia catenaformis DSM 20559, Eggerthia catenaformis OT 569, Eggerthia catenaformis OT 569 = DSM 20559, Lactobacillus catenaformis DSM 20559 = OT 569, Lactobacillus catenaformis OT 569
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.