STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMD17274.1Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. (143 aa)    
Predicted Functional Partners:
EMD17273.1
Universal bacterial protein YeaZ.
 
 
 0.964
EMD17272.1
YjeE family ATPase.
  
  
 0.884
tsaD
Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
  
 0.873
rex
Hypothetical protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
       0.811
asnS
asparagine-tRNA ligase.
       0.800
EMD17271.1
Hypothetical protein.
       0.781
EMD17279.1
Hypothetical protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.673
EMD17278.1
Hypothetical protein.
       0.584
EMD17270.1
HAD hydrolase, family IA.
  
    0.546
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
   
  0.539
Your Current Organism:
Eggerthia catenaformis
NCBI taxonomy Id: 999415
Other names: E. catenaformis OT 569 = DSM 20559, Eggerthia catenaformis DSM 20559, Eggerthia catenaformis OT 569, Eggerthia catenaformis OT 569 = DSM 20559, Lactobacillus catenaformis DSM 20559 = OT 569, Lactobacillus catenaformis OT 569
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.