STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMD16991.1Hypothetical protein. (70 aa)    
Predicted Functional Partners:
EMD16985.1
Hypothetical protein.
       0.773
EMD16986.1
Hypothetical protein.
       0.773
EMD16987.1
Hypothetical protein.
       0.773
EMD16988.1
Hypothetical protein.
       0.773
EMD16989.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein; Overlaps another CDS with the same product name.
       0.773
EMD16990.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein; Overlaps another CDS with the same product name.
       0.773
EMD16984.1
Hypothetical protein.
       0.535
rpmG
Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
       0.462
Your Current Organism:
Eggerthia catenaformis
NCBI taxonomy Id: 999415
Other names: E. catenaformis OT 569 = DSM 20559, Eggerthia catenaformis DSM 20559, Eggerthia catenaformis OT 569, Eggerthia catenaformis OT 569 = DSM 20559, Lactobacillus catenaformis DSM 20559 = OT 569, Lactobacillus catenaformis OT 569
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.