STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMD16831.1Hypothetical protein. (161 aa)    
Predicted Functional Partners:
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
       0.590
EMD16827.1
UDP-N-acetylmuramyl-tripeptide synthetase; Belongs to the MurCDEF family. MurE subfamily.
       0.590
EMD16828.1
MiaB-like tRNA modifying enzyme.
       0.590
EMD16829.1
Hypothetical protein.
       0.590
EMD16830.1
RsmE family RNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.590
EMD16832.1
ATP-dependent chaperone ClpB; Belongs to the ClpA/ClpB family.
       0.570
rpsU
30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
       0.426
Your Current Organism:
Eggerthia catenaformis
NCBI taxonomy Id: 999415
Other names: E. catenaformis OT 569 = DSM 20559, Eggerthia catenaformis DSM 20559, Eggerthia catenaformis OT 569, Eggerthia catenaformis OT 569 = DSM 20559, Lactobacillus catenaformis DSM 20559 = OT 569, Lactobacillus catenaformis OT 569
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.