STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMD16742.1Hypothetical protein. (83 aa)    
Predicted Functional Partners:
EMD16743.1
Sigma-70 family RNA polymerase sigma factor.
    0.993
EMD16755.1
Hypothetical protein.
  
     0.712
EMD16751.1
Hypothetical protein.
  
     0.678
EMD16759.1
Hypothetical protein.
  
     0.654
EMD16758.1
Hypothetical protein.
  
     0.651
EMD16750.1
Hypothetical protein.
  
     0.644
EMD16741.1
Hypothetical protein.
  
     0.616
EMD16753.1
Hypothetical protein.
  
     0.576
EMD16757.1
Hypothetical protein.
  
    0.568
EMD16722.1
Hypothetical protein.
  
     0.548
Your Current Organism:
Eggerthia catenaformis
NCBI taxonomy Id: 999415
Other names: E. catenaformis OT 569 = DSM 20559, Eggerthia catenaformis DSM 20559, Eggerthia catenaformis OT 569, Eggerthia catenaformis OT 569 = DSM 20559, Lactobacillus catenaformis DSM 20559 = OT 569, Lactobacillus catenaformis OT 569
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.