STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMD16459.1Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family. (511 aa)    
Predicted Functional Partners:
EMD16501.1
PTS system, glucose subfamily, IIA component.
 
 0.995
EMD16289.1
PTS system, Fru family, IIC component.
   
 
 0.962
EMD16026.1
PTS system, glucose-like IIB component.
  
 
 0.953
EMD16498.1
Hypothetical protein.
 
 0.927
EMD17689.1
PTS system, mannose/fructose/sorbose family, IIB component.
   
 
 0.921
EMD16458.1
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
  
 
0.829
EMD17495.1
Hypothetical protein; Belongs to the glycosyl hydrolase 1 family.
   
 
 0.658
EMD15948.1
Hypothetical protein; Belongs to the glycosyl hydrolase 1 family.
   
 
 0.658
EMD16394.1
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
  
 
0.642
EMD16502.1
Hypothetical protein.
 
 
 0.620
Your Current Organism:
Eggerthia catenaformis
NCBI taxonomy Id: 999415
Other names: E. catenaformis OT 569 = DSM 20559, Eggerthia catenaformis DSM 20559, Eggerthia catenaformis OT 569, Eggerthia catenaformis OT 569 = DSM 20559, Lactobacillus catenaformis DSM 20559 = OT 569, Lactobacillus catenaformis OT 569
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