Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEA58707.1 | AEA59632.1 | bgla_1g00020 | bgla_1g09500 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | ATP dependent DNA ligase. | 0.945 |
| AEA58707.1 | AEA59920.1 | bgla_1g00020 | bgla_1g12430 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA primase, small subunit. | 0.950 |
| AEA58707.1 | AEA60989.1 | bgla_1g00020 | bgla_1g23620 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase III, delta prime subunit. | 0.999 |
| AEA58707.1 | AEA61437.1 | bgla_1g00020 | bgla_1g28220 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Exodeoxyribonuclease III Xth. | 0.783 |
| AEA58707.1 | AEA62667.1 | bgla_1g00020 | bgla_2g01900 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase II. | 0.991 |
| AEA58707.1 | polA | bgla_1g00020 | bgla_2g21370 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.997 |
| AEA59631.1 | AEA59632.1 | bgla_1g09490 | bgla_1g09500 | Putative exonuclease involved in mRNA processing. | ATP dependent DNA ligase. | 0.992 |
| AEA59631.1 | AEA59920.1 | bgla_1g09490 | bgla_1g12430 | Putative exonuclease involved in mRNA processing. | DNA primase, small subunit. | 0.742 |
| AEA59631.1 | AEA64469.1 | bgla_1g09490 | bgla_2g20340 | Putative exonuclease involved in mRNA processing. | Hypothetical protein. | 0.459 |
| AEA59631.1 | AEA64481.1 | bgla_1g09490 | bgla_2g20460 | Putative exonuclease involved in mRNA processing. | DNA topoisomerase, type I, putative. | 0.582 |
| AEA59631.1 | polA | bgla_1g09490 | bgla_2g21370 | Putative exonuclease involved in mRNA processing. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.685 |
| AEA59632.1 | AEA58707.1 | bgla_1g09500 | bgla_1g00020 | ATP dependent DNA ligase. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.945 |
| AEA59632.1 | AEA59631.1 | bgla_1g09500 | bgla_1g09490 | ATP dependent DNA ligase. | Putative exonuclease involved in mRNA processing. | 0.992 |
| AEA59632.1 | AEA59920.1 | bgla_1g09500 | bgla_1g12430 | ATP dependent DNA ligase. | DNA primase, small subunit. | 0.705 |
| AEA59632.1 | AEA60989.1 | bgla_1g09500 | bgla_1g23620 | ATP dependent DNA ligase. | DNA polymerase III, delta prime subunit. | 0.696 |
| AEA59632.1 | AEA61437.1 | bgla_1g09500 | bgla_1g28220 | ATP dependent DNA ligase. | Exodeoxyribonuclease III Xth. | 0.548 |
| AEA59632.1 | AEA62667.1 | bgla_1g09500 | bgla_2g01900 | ATP dependent DNA ligase. | DNA polymerase II. | 0.703 |
| AEA59632.1 | AEA64469.1 | bgla_1g09500 | bgla_2g20340 | ATP dependent DNA ligase. | Hypothetical protein. | 0.409 |
| AEA59632.1 | AEA64481.1 | bgla_1g09500 | bgla_2g20460 | ATP dependent DNA ligase. | DNA topoisomerase, type I, putative. | 0.696 |
| AEA59632.1 | ku | bgla_1g09500 | bgla_1g12420 | ATP dependent DNA ligase. | Ku domain protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.630 |
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