STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000473205_01154Unannotated protein. (162 aa)    
Predicted Functional Partners:
GCA_000473205_03912
Unannotated protein.
 
 0.999
GCA_000473205_04413
Unannotated protein.
 
 0.999
GCA_000473205_01153
Unannotated protein.
 
 0.996
GCA_000473205_03145
Unannotated protein.
 
 0.996
GCA_000473205_01943
Unannotated protein.
 
 
 0.966
GCA_000473205_00591
Unannotated protein.
  
 0.965
GCA_000473205_01808
Unannotated protein.
 
 
 0.960
GCA_000473205_02487
Unannotated protein.
 
 
 0.944
GCA_000473205_01351
Unannotated protein.
 
 
 0.933
GCA_000473205_00435
Unannotated protein.
  
 
 0.928
Your Current Organism:
Pseudophaeobacter arcticus
NCBI taxonomy Id: 999550
Other names: P. arcticus DSM 23566, Phaeobacter arcticus 20188, Phaeobacter arcticus DSM 23566, Phaeobacter sp. 20188, Pseudophaeobacter arcticus DSM 23566
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.