STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000473205_03790Unannotated protein. (394 aa)    
Predicted Functional Partners:
GCA_000473205_03704
Unannotated protein.
    
 0.928
GCA_000473205_03519
Unannotated protein.
 
  
 0.909
GCA_000473205_02450
Unannotated protein.
  
 
 0.904
GCA_000473205_02080
Unannotated protein.
  
  
0.881
GCA_000473205_03513
Unannotated protein.
    
 0.872
GCA_000473205_03791
Unannotated protein.
  
  
 0.832
GCA_000473205_03792
Unannotated protein.
     
 0.770
GCA_000473205_02030
Unannotated protein.
   
 
 0.759
GCA_000473205_00678
Unannotated protein.
 
 0.737
GCA_000473205_00232
Unannotated protein.
    
 0.727
Your Current Organism:
Pseudophaeobacter arcticus
NCBI taxonomy Id: 999550
Other names: P. arcticus DSM 23566, Phaeobacter arcticus 20188, Phaeobacter arcticus DSM 23566, Phaeobacter sp. 20188, Pseudophaeobacter arcticus DSM 23566
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.